Evidence of genetically diverse virulent mating types of Phytophthora capsici from Capsicum annum L.
Identifieur interne : 000781 ( Main/Exploration ); précédent : 000780; suivant : 000782Evidence of genetically diverse virulent mating types of Phytophthora capsici from Capsicum annum L.
Auteurs : Kiran Nawaz [Pakistan] ; Ahmad Ali Shahid [Pakistan] ; Louis Bengyella [États-Unis, Cameroun] ; Muhammad Nasir Subhani [Pakistan] ; Muhammad Ali [Pakistan] ; Waheed Anwar [Pakistan] ; Sehrish Iftikhar [Pakistan] ; Shinawar Waseem Ali [Pakistan]Source :
- World journal of microbiology & biotechnology [ 1573-0972 ] ; 2018.
Descripteurs français
- KwdFr :
- ADN ribosomique (génétique), Acrylamides (pharmacologie), Alanine (analogues et dérivés), Alanine (pharmacologie), Analyse de regroupements (MeSH), Capsicum (microbiologie), Facteurs de risque (MeSH), Fongicides industriels (pharmacologie), Gènes fongiques du type conjugant (génétique), Maladies des plantes (microbiologie), Morpholines (pharmacologie), Pakistan (MeSH), Phylogenèse (MeSH), Phytophthora (classification), Phytophthora (effets des médicaments et des substances chimiques), Phytophthora (génétique), Phytophthora (isolement et purification), Phénotype (MeSH), Pyrimidines (pharmacologie), Racines de plante (parasitologie), Résistance aux substances (MeSH), Sporanges (cytologie), Strobilurines (pharmacologie), Température (MeSH), Tubuline (génétique), Variation génétique (MeSH), Virulence (MeSH), Élongation de la traduction (génétique), Évolution moléculaire (MeSH).
- MESH :
- analogues et dérivés : Alanine.
- cytologie : Sporanges.
- effets des médicaments et des substances chimiques : Phytophthora.
- génétique : ADN ribosomique, Gènes fongiques du type conjugant, Phytophthora, Tubuline, Élongation de la traduction.
- isolement et purification : Phytophthora.
- microbiologie : Capsicum, Maladies des plantes.
- parasitologie : Racines de plante.
- pharmacologie : Acrylamides, Alanine, Fongicides industriels, Morpholines, Pyrimidines, Strobilurines.
- Analyse de regroupements, Facteurs de risque, Pakistan, Phylogenèse, Phénotype, Résistance aux substances, Température, Variation génétique, Virulence, Évolution moléculaire.
English descriptors
- KwdEn :
- Acrylamides (pharmacology), Alanine (analogs & derivatives), Alanine (pharmacology), Capsicum (microbiology), Cluster Analysis (MeSH), DNA, Ribosomal (genetics), Drug Resistance (MeSH), Evolution, Molecular (MeSH), Fungicides, Industrial (pharmacology), Genes, Mating Type, Fungal (genetics), Genetic Variation (MeSH), Morpholines (pharmacology), Pakistan (MeSH), Peptide Chain Elongation, Translational (genetics), Phenotype (MeSH), Phylogeny (MeSH), Phytophthora (classification), Phytophthora (drug effects), Phytophthora (genetics), Phytophthora (isolation & purification), Plant Diseases (microbiology), Plant Roots (parasitology), Pyrimidines (pharmacology), Risk Factors (MeSH), Sporangia (cytology), Strobilurins (pharmacology), Temperature (MeSH), Tubulin (genetics), Virulence (MeSH).
- MESH :
- chemical , analogs & derivatives : Alanine.
- chemical , genetics : DNA, Ribosomal, Tubulin.
- chemical , pharmacology : Acrylamides, Alanine, Fungicides, Industrial, Morpholines, Pyrimidines, Strobilurins.
- classification : Phytophthora.
- cytology : Sporangia.
- drug effects : Phytophthora.
- genetics : Genes, Mating Type, Fungal, Peptide Chain Elongation, Translational, Phytophthora.
- isolation & purification : Phytophthora.
- microbiology : Capsicum, Plant Diseases.
- parasitology : Plant Roots.
- Cluster Analysis, Drug Resistance, Evolution, Molecular, Genetic Variation, Pakistan, Phenotype, Phylogeny, Risk Factors, Temperature, Virulence.
Abstract
Chili pepper (Capsicum annum L.) is an important economic crop that is severely destroyed by the filamentous oomycete Phytophthora capsici. Little is known about this pathogen in key chili pepper farms in Punjab province, Pakistan. We investigated the genetic diversity of P. capsici strains using standard taxonomic and molecular tools, and characterized their colony growth patterns as well as their disease severity on chili pepper plants under the greenhouse conditions. Phylogenetic analysis based on ribosomal DNA (rDNA), β-tubulin and translation elongation factor 1α loci revealed divergent evolution in the population structure of P. capsici isolates. The mean oospore diameter of mating type A1 isolates was greater than that of mating type A2 isolates. We provide first evidence of an uneven distribution of highly virulent mating type A1 and A2 of P. capsici that are insensitive to mefenoxam, pyrimorph, dimethomorph, and azoxystrobin fungicides, and represent a risk factor that could ease outpacing the current P. capsici management strategies.
DOI: 10.1007/s11274-018-2511-y
PubMed: 30101403
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">Evidence of genetically diverse virulent mating types of Phytophthora capsici from Capsicum annum L.</title><author><name sortKey="Nawaz, Kiran" sort="Nawaz, Kiran" uniqKey="Nawaz K" first="Kiran" last="Nawaz">Kiran Nawaz</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan. kirannawaz34@gmail.com.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author><author><name sortKey="Shahid, Ahmad Ali" sort="Shahid, Ahmad Ali" uniqKey="Shahid A" first="Ahmad Ali" last="Shahid">Ahmad Ali Shahid</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Centre of Excellence in Molecular Biology, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author><author><name sortKey="Bengyella, Louis" sort="Bengyella, Louis" uniqKey="Bengyella L" first="Louis" last="Bengyella">Louis Bengyella</name><affiliation wicri:level="1"><nlm:affiliation>Tree Fruit Research and Extension Center (TFREC), College of Agricultural, Human and Natural Resource Sciences (CAHNRS), Washington State University, Wenatchee, USA. bengyellalouis@gmail.com.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Tree Fruit Research and Extension Center (TFREC), College of Agricultural, Human and Natural Resource Sciences (CAHNRS), Washington State University, Wenatchee</wicri:regionArea><wicri:noRegion>Wenatchee</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Control, Advanced Biotech Cooperative, Bali-Nyonga, Cameroon. bengyellalouis@gmail.com.</nlm:affiliation><country xml:lang="fr">Cameroun</country><wicri:regionArea>Department of Biological Control, Advanced Biotech Cooperative, Bali-Nyonga</wicri:regionArea><wicri:noRegion>Bali-Nyonga</wicri:noRegion></affiliation></author><author><name sortKey="Subhani, Muhammad Nasir" sort="Subhani, Muhammad Nasir" uniqKey="Subhani M" first="Muhammad Nasir" last="Subhani">Muhammad Nasir Subhani</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author><author><name sortKey="Ali, Muhammad" sort="Ali, Muhammad" uniqKey="Ali M" first="Muhammad" last="Ali">Muhammad Ali</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author><author><name sortKey="Anwar, Waheed" sort="Anwar, Waheed" uniqKey="Anwar W" first="Waheed" last="Anwar">Waheed Anwar</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author><author><name sortKey="Iftikhar, Sehrish" sort="Iftikhar, Sehrish" uniqKey="Iftikhar S" first="Sehrish" last="Iftikhar">Sehrish Iftikhar</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author><author><name sortKey="Ali, Shinawar Waseem" sort="Ali, Shinawar Waseem" uniqKey="Ali S" first="Shinawar Waseem" last="Ali">Shinawar Waseem Ali</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2018">2018</date><idno type="RBID">pubmed:30101403</idno><idno type="pmid">30101403</idno><idno type="doi">10.1007/s11274-018-2511-y</idno><idno type="wicri:Area/Main/Corpus">000695</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000695</idno><idno type="wicri:Area/Main/Curation">000695</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000695</idno><idno type="wicri:Area/Main/Exploration">000695</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Evidence of genetically diverse virulent mating types of Phytophthora capsici from Capsicum annum L.</title><author><name sortKey="Nawaz, Kiran" sort="Nawaz, Kiran" uniqKey="Nawaz K" first="Kiran" last="Nawaz">Kiran Nawaz</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan. kirannawaz34@gmail.com.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author><author><name sortKey="Shahid, Ahmad Ali" sort="Shahid, Ahmad Ali" uniqKey="Shahid A" first="Ahmad Ali" last="Shahid">Ahmad Ali Shahid</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Centre of Excellence in Molecular Biology, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author><author><name sortKey="Bengyella, Louis" sort="Bengyella, Louis" uniqKey="Bengyella L" first="Louis" last="Bengyella">Louis Bengyella</name><affiliation wicri:level="1"><nlm:affiliation>Tree Fruit Research and Extension Center (TFREC), College of Agricultural, Human and Natural Resource Sciences (CAHNRS), Washington State University, Wenatchee, USA. bengyellalouis@gmail.com.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Tree Fruit Research and Extension Center (TFREC), College of Agricultural, Human and Natural Resource Sciences (CAHNRS), Washington State University, Wenatchee</wicri:regionArea><wicri:noRegion>Wenatchee</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Department of Biological Control, Advanced Biotech Cooperative, Bali-Nyonga, Cameroon. bengyellalouis@gmail.com.</nlm:affiliation><country xml:lang="fr">Cameroun</country><wicri:regionArea>Department of Biological Control, Advanced Biotech Cooperative, Bali-Nyonga</wicri:regionArea><wicri:noRegion>Bali-Nyonga</wicri:noRegion></affiliation></author><author><name sortKey="Subhani, Muhammad Nasir" sort="Subhani, Muhammad Nasir" uniqKey="Subhani M" first="Muhammad Nasir" last="Subhani">Muhammad Nasir Subhani</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author><author><name sortKey="Ali, Muhammad" sort="Ali, Muhammad" uniqKey="Ali M" first="Muhammad" last="Ali">Muhammad Ali</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author><author><name sortKey="Anwar, Waheed" sort="Anwar, Waheed" uniqKey="Anwar W" first="Waheed" last="Anwar">Waheed Anwar</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author><author><name sortKey="Iftikhar, Sehrish" sort="Iftikhar, Sehrish" uniqKey="Iftikhar S" first="Sehrish" last="Iftikhar">Sehrish Iftikhar</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author><author><name sortKey="Ali, Shinawar Waseem" sort="Ali, Shinawar Waseem" uniqKey="Ali S" first="Shinawar Waseem" last="Ali">Shinawar Waseem Ali</name><affiliation wicri:level="1"><nlm:affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</nlm:affiliation><country xml:lang="fr">Pakistan</country><wicri:regionArea>Institute of Agricultural Science, University of the Punjab, Lahore</wicri:regionArea><wicri:noRegion>Lahore</wicri:noRegion></affiliation></author></analytic><series><title level="j">World journal of microbiology & biotechnology</title><idno type="eISSN">1573-0972</idno><imprint><date when="2018" type="published">2018</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Acrylamides (pharmacology)</term><term>Alanine (analogs & derivatives)</term><term>Alanine (pharmacology)</term><term>Capsicum (microbiology)</term><term>Cluster Analysis (MeSH)</term><term>DNA, Ribosomal (genetics)</term><term>Drug Resistance (MeSH)</term><term>Evolution, Molecular (MeSH)</term><term>Fungicides, Industrial (pharmacology)</term><term>Genes, Mating Type, Fungal (genetics)</term><term>Genetic Variation (MeSH)</term><term>Morpholines (pharmacology)</term><term>Pakistan (MeSH)</term><term>Peptide Chain Elongation, Translational (genetics)</term><term>Phenotype (MeSH)</term><term>Phylogeny (MeSH)</term><term>Phytophthora (classification)</term><term>Phytophthora (drug effects)</term><term>Phytophthora (genetics)</term><term>Phytophthora (isolation & purification)</term><term>Plant Diseases (microbiology)</term><term>Plant Roots (parasitology)</term><term>Pyrimidines (pharmacology)</term><term>Risk Factors (MeSH)</term><term>Sporangia (cytology)</term><term>Strobilurins (pharmacology)</term><term>Temperature (MeSH)</term><term>Tubulin (genetics)</term><term>Virulence (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN ribosomique (génétique)</term><term>Acrylamides (pharmacologie)</term><term>Alanine (analogues et dérivés)</term><term>Alanine (pharmacologie)</term><term>Analyse de regroupements (MeSH)</term><term>Capsicum (microbiologie)</term><term>Facteurs de risque (MeSH)</term><term>Fongicides industriels (pharmacologie)</term><term>Gènes fongiques du type conjugant (génétique)</term><term>Maladies des plantes (microbiologie)</term><term>Morpholines (pharmacologie)</term><term>Pakistan (MeSH)</term><term>Phylogenèse (MeSH)</term><term>Phytophthora (classification)</term><term>Phytophthora (effets des médicaments et des substances chimiques)</term><term>Phytophthora (génétique)</term><term>Phytophthora (isolement et purification)</term><term>Phénotype (MeSH)</term><term>Pyrimidines (pharmacologie)</term><term>Racines de plante (parasitologie)</term><term>Résistance aux substances (MeSH)</term><term>Sporanges (cytologie)</term><term>Strobilurines (pharmacologie)</term><term>Température (MeSH)</term><term>Tubuline (génétique)</term><term>Variation génétique (MeSH)</term><term>Virulence (MeSH)</term><term>Élongation de la traduction (génétique)</term><term>Évolution moléculaire (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analogs & derivatives" xml:lang="en"><term>Alanine</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Ribosomal</term><term>Tubulin</term></keywords><keywords scheme="MESH" type="chemical" qualifier="pharmacology" xml:lang="en"><term>Acrylamides</term><term>Alanine</term><term>Fungicides, Industrial</term><term>Morpholines</term><term>Pyrimidines</term><term>Strobilurins</term></keywords><keywords scheme="MESH" qualifier="analogues et dérivés" xml:lang="fr"><term>Alanine</term></keywords><keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="cytologie" xml:lang="fr"><term>Sporanges</term></keywords><keywords scheme="MESH" qualifier="cytology" xml:lang="en"><term>Sporangia</term></keywords><keywords scheme="MESH" qualifier="drug effects" xml:lang="en"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="effets des médicaments et des substances chimiques" xml:lang="fr"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Genes, Mating Type, Fungal</term><term>Peptide Chain Elongation, Translational</term><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN ribosomique</term><term>Gènes fongiques du type conjugant</term><term>Phytophthora</term><term>Tubuline</term><term>Élongation de la traduction</term></keywords><keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Capsicum</term><term>Maladies des plantes</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Capsicum</term><term>Plant Diseases</term></keywords><keywords scheme="MESH" qualifier="parasitologie" xml:lang="fr"><term>Racines de plante</term></keywords><keywords scheme="MESH" qualifier="parasitology" xml:lang="en"><term>Plant Roots</term></keywords><keywords scheme="MESH" qualifier="pharmacologie" xml:lang="fr"><term>Acrylamides</term><term>Alanine</term><term>Fongicides industriels</term><term>Morpholines</term><term>Pyrimidines</term><term>Strobilurines</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Cluster Analysis</term><term>Drug Resistance</term><term>Evolution, Molecular</term><term>Genetic Variation</term><term>Pakistan</term><term>Phenotype</term><term>Phylogeny</term><term>Risk Factors</term><term>Temperature</term><term>Virulence</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Analyse de regroupements</term><term>Facteurs de risque</term><term>Pakistan</term><term>Phylogenèse</term><term>Phénotype</term><term>Résistance aux substances</term><term>Température</term><term>Variation génétique</term><term>Virulence</term><term>Évolution moléculaire</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Chili pepper (Capsicum annum L.) is an important economic crop that is severely destroyed by the filamentous oomycete Phytophthora capsici. Little is known about this pathogen in key chili pepper farms in Punjab province, Pakistan. We investigated the genetic diversity of P. capsici strains using standard taxonomic and molecular tools, and characterized their colony growth patterns as well as their disease severity on chili pepper plants under the greenhouse conditions. Phylogenetic analysis based on ribosomal DNA (rDNA), β-tubulin and translation elongation factor 1α loci revealed divergent evolution in the population structure of P. capsici isolates. The mean oospore diameter of mating type A1 isolates was greater than that of mating type A2 isolates. We provide first evidence of an uneven distribution of highly virulent mating type A1 and A2 of P. capsici that are insensitive to mefenoxam, pyrimorph, dimethomorph, and azoxystrobin fungicides, and represent a risk factor that could ease outpacing the current P. capsici management strategies.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">30101403</PMID><DateCompleted><Year>2018</Year><Month>10</Month><Day>22</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>14</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1573-0972</ISSN><JournalIssue CitedMedium="Internet"><Volume>34</Volume><Issue>9</Issue><PubDate><Year>2018</Year><Month>Aug</Month><Day>12</Day></PubDate></JournalIssue><Title>World journal of microbiology & biotechnology</Title><ISOAbbreviation>World J Microbiol Biotechnol</ISOAbbreviation></Journal><ArticleTitle>Evidence of genetically diverse virulent mating types of Phytophthora capsici from Capsicum annum L.</ArticleTitle><Pagination><MedlinePgn>130</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1007/s11274-018-2511-y</ELocationID><Abstract><AbstractText>Chili pepper (Capsicum annum L.) is an important economic crop that is severely destroyed by the filamentous oomycete Phytophthora capsici. Little is known about this pathogen in key chili pepper farms in Punjab province, Pakistan. We investigated the genetic diversity of P. capsici strains using standard taxonomic and molecular tools, and characterized their colony growth patterns as well as their disease severity on chili pepper plants under the greenhouse conditions. Phylogenetic analysis based on ribosomal DNA (rDNA), β-tubulin and translation elongation factor 1α loci revealed divergent evolution in the population structure of P. capsici isolates. The mean oospore diameter of mating type A1 isolates was greater than that of mating type A2 isolates. We provide first evidence of an uneven distribution of highly virulent mating type A1 and A2 of P. capsici that are insensitive to mefenoxam, pyrimorph, dimethomorph, and azoxystrobin fungicides, and represent a risk factor that could ease outpacing the current P. capsici management strategies.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Nawaz</LastName><ForeName>Kiran</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan. kirannawaz34@gmail.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Shahid</LastName><ForeName>Ahmad Ali</ForeName><Initials>AA</Initials><AffiliationInfo><Affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bengyella</LastName><ForeName>Louis</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>Tree Fruit Research and Extension Center (TFREC), College of Agricultural, Human and Natural Resource Sciences (CAHNRS), Washington State University, Wenatchee, USA. bengyellalouis@gmail.com.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Biological Control, Advanced Biotech Cooperative, Bali-Nyonga, Cameroon. bengyellalouis@gmail.com.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Subhani</LastName><ForeName>Muhammad Nasir</ForeName><Initials>MN</Initials><AffiliationInfo><Affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ali</LastName><ForeName>Muhammad</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Anwar</LastName><ForeName>Waheed</ForeName><Initials>W</Initials><AffiliationInfo><Affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Iftikhar</LastName><ForeName>Sehrish</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ali</LastName><ForeName>Shinawar Waseem</ForeName><Initials>SW</Initials><AffiliationInfo><Affiliation>Institute of Agricultural Science, University of the Punjab, Lahore, Pakistan.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>112-34924-2AV1-197</GrantID><Agency>Higher Education Commission of Pakistan</Agency><Country></Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2018</Year><Month>08</Month><Day>12</Day></ArticleDate></Article><MedlineJournalInfo><Country>Germany</Country><MedlineTA>World J Microbiol Biotechnol</MedlineTA><NlmUniqueID>9012472</NlmUniqueID><ISSNLinking>0959-3993</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D000178">Acrylamides</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D004275">DNA, Ribosomal</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005659">Fungicides, Industrial</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D009025">Morpholines</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D011743">Pyrimidines</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D000073739">Strobilurins</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D014404">Tubulin</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="C550850">pyrimorph</NameOfSubstance></Chemical><Chemical><RegistryNumber>3EXL2158GV</RegistryNumber><NameOfSubstance UI="C076154">dimethomorph</NameOfSubstance></Chemical><Chemical><RegistryNumber>F1Q54ONN4H</RegistryNumber><NameOfSubstance UI="C473256">mefenoxam</NameOfSubstance></Chemical><Chemical><RegistryNumber>NYH7Y08IPM</RegistryNumber><NameOfSubstance UI="C087670">azoxystrobin</NameOfSubstance></Chemical><Chemical><RegistryNumber>OF5P57N2ZX</RegistryNumber><NameOfSubstance UI="D000409">Alanine</NameOfSubstance></Chemical></ChemicalList><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D000178" MajorTopicYN="N">Acrylamides</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000409" MajorTopicYN="N">Alanine</DescriptorName><QualifierName UI="Q000031" MajorTopicYN="N">analogs & derivatives</QualifierName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D002212" MajorTopicYN="N">Capsicum</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D016000" MajorTopicYN="N">Cluster Analysis</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D004275" MajorTopicYN="N">DNA, Ribosomal</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D004351" MajorTopicYN="N">Drug Resistance</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D019143" MajorTopicYN="N">Evolution, Molecular</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D005659" MajorTopicYN="N">Fungicides, Industrial</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D049770" MajorTopicYN="N">Genes, Mating Type, Fungal</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014644" MajorTopicYN="Y">Genetic Variation</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D009025" MajorTopicYN="N">Morpholines</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010154" MajorTopicYN="N">Pakistan</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010441" MajorTopicYN="N">Peptide Chain Elongation, Translational</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010641" MajorTopicYN="N">Phenotype</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D010838" MajorTopicYN="N">Phytophthora</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName><QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName><QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName><QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName><QualifierName UI="Q000469" MajorTopicYN="N">parasitology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D011743" MajorTopicYN="N">Pyrimidines</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012307" MajorTopicYN="N">Risk Factors</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D058432" MajorTopicYN="N">Sporangia</DescriptorName><QualifierName UI="Q000166" MajorTopicYN="N">cytology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D000073739" MajorTopicYN="N">Strobilurins</DescriptorName><QualifierName UI="Q000494" MajorTopicYN="N">pharmacology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013696" MajorTopicYN="N">Temperature</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D014404" MajorTopicYN="N">Tubulin</DescriptorName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014774" MajorTopicYN="N">Virulence</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Fungicide resistance</Keyword><Keyword MajorTopicYN="N">Oomycetes</Keyword><Keyword MajorTopicYN="N">Pathogenicity test</Keyword><Keyword MajorTopicYN="N">Phylogeny</Keyword><Keyword MajorTopicYN="N">Root-rot</Keyword><Keyword MajorTopicYN="N">β-Tubulin</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2018</Year><Month>06</Month><Day>12</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2018</Year><Month>07</Month><Day>28</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2018</Year><Month>8</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2018</Year><Month>8</Month><Day>14</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2018</Year><Month>10</Month><Day>23</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">30101403</ArticleId><ArticleId IdType="doi">10.1007/s11274-018-2511-y</ArticleId><ArticleId IdType="pii">10.1007/s11274-018-2511-y</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Biomed Res Int. 2014;2014:378372</Citation><ArticleIdList><ArticleId IdType="pubmed">24987680</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 1989 Nov;123(3):585-95</Citation><ArticleIdList><ArticleId IdType="pubmed">2513255</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2008 Jun;98(6):688-94</Citation><ArticleIdList><ArticleId IdType="pubmed">18944293</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2017 Jul 10;7(1):5007</Citation><ArticleIdList><ArticleId IdType="pubmed">28694506</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2014 Mar-Apr;106(2):362-7</Citation><ArticleIdList><ArticleId IdType="pubmed">24782503</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2011 Sep;101(9):1061-73</Citation><ArticleIdList><ArticleId IdType="pubmed">21486143</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Genet Biol. 2000 Jun;30(1):17-32</Citation><ArticleIdList><ArticleId IdType="pubmed">10955905</ArticleId></ArticleIdList></Reference><Reference><Citation>Mycologia. 2012 Jan-Feb;104(1):102-7</Citation><ArticleIdList><ArticleId IdType="pubmed">21933926</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 1993 May;10(3):512-26</Citation><ArticleIdList><ArticleId IdType="pubmed">8336541</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Plant Pathol. 2016 Apr;17(3):369-87</Citation><ArticleIdList><ArticleId IdType="pubmed">26095317</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Microbiol. 2016 Apr 29;7:615</Citation><ArticleIdList><ArticleId IdType="pubmed">27199944</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Evol. 1985;22(2):160-74</Citation><ArticleIdList><ArticleId IdType="pubmed">3934395</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2013 Dec;30(12):2725-9</Citation><ArticleIdList><ArticleId IdType="pubmed">24132122</ArticleId></ArticleIdList></Reference><Reference><Citation>Nucleic Acids Res. 2004 Mar 19;32(5):1792-7</Citation><ArticleIdList><ArticleId IdType="pubmed">15034147</ArticleId></ArticleIdList></Reference><Reference><Citation>Proteomics. 2013 May;13(9):1457-66</Citation><ArticleIdList><ArticleId IdType="pubmed">23468041</ArticleId></ArticleIdList></Reference><Reference><Citation>Fungal Genet Biol. 2004 Aug;41(8):766-82</Citation><ArticleIdList><ArticleId IdType="pubmed">15219561</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Plant Pathol. 2014 Sep;15(7):664-76</Citation><ArticleIdList><ArticleId IdType="pubmed">24521429</ArticleId></ArticleIdList></Reference><Reference><Citation>Genet Mol Res. 2012 Dec 17;11(4):4285-96</Citation><ArticleIdList><ArticleId IdType="pubmed">23315808</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2013;8(2):e56513</Citation><ArticleIdList><ArticleId IdType="pubmed">23431382</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Phytopathol. 2002;40:349-79</Citation><ArticleIdList><ArticleId IdType="pubmed">12147764</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 2010 Jun;100(6):619-27</Citation><ArticleIdList><ArticleId IdType="pubmed">20465418</ArticleId></ArticleIdList></Reference><Reference><Citation>Phytopathology. 1997 Apr;87(4):448-53</Citation><ArticleIdList><ArticleId IdType="pubmed">18945126</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Cameroun</li><li>Pakistan</li><li>États-Unis</li></country></list><tree><country name="Pakistan"><noRegion><name sortKey="Nawaz, Kiran" sort="Nawaz, Kiran" uniqKey="Nawaz K" first="Kiran" last="Nawaz">Kiran Nawaz</name></noRegion><name sortKey="Ali, Muhammad" sort="Ali, Muhammad" uniqKey="Ali M" first="Muhammad" last="Ali">Muhammad Ali</name><name sortKey="Ali, Shinawar Waseem" sort="Ali, Shinawar Waseem" uniqKey="Ali S" first="Shinawar Waseem" last="Ali">Shinawar Waseem Ali</name><name sortKey="Anwar, Waheed" sort="Anwar, Waheed" uniqKey="Anwar W" first="Waheed" last="Anwar">Waheed Anwar</name><name sortKey="Iftikhar, Sehrish" sort="Iftikhar, Sehrish" uniqKey="Iftikhar S" first="Sehrish" last="Iftikhar">Sehrish Iftikhar</name><name sortKey="Shahid, Ahmad Ali" sort="Shahid, Ahmad Ali" uniqKey="Shahid A" first="Ahmad Ali" last="Shahid">Ahmad Ali Shahid</name><name sortKey="Shahid, Ahmad Ali" sort="Shahid, Ahmad Ali" uniqKey="Shahid A" first="Ahmad Ali" last="Shahid">Ahmad Ali Shahid</name><name sortKey="Subhani, Muhammad Nasir" sort="Subhani, Muhammad Nasir" uniqKey="Subhani M" first="Muhammad Nasir" last="Subhani">Muhammad Nasir Subhani</name></country><country name="États-Unis"><noRegion><name sortKey="Bengyella, Louis" sort="Bengyella, Louis" uniqKey="Bengyella L" first="Louis" last="Bengyella">Louis Bengyella</name></noRegion></country><country name="Cameroun"><noRegion><name sortKey="Bengyella, Louis" sort="Bengyella, Louis" uniqKey="Bengyella L" first="Louis" last="Bengyella">Louis Bengyella</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PhytophthoraV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000781 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000781 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien
|wiki= Bois
|area= PhytophthoraV1
|flux= Main
|étape= Exploration
|type= RBID
|clé= pubmed:30101403
|texte= Evidence of genetically diverse virulent mating types of Phytophthora capsici from Capsicum annum L.
}}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:30101403" \
| HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \
| NlmPubMed2Wicri -a PhytophthoraV1
| This area was generated with Dilib version V0.6.38. |  |